Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6837

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6836: 15204 - Interpro Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family, at 237797 to 238899 15204 mRNA_6837: 15205 - HMMPfam-DUF2407 ubiquitin-like domain-PF10302,HMMPfam-DUF2407 C-terminal domain-PF13373, at 239396 to 240785 15205 mRNA_6838: 15206 - K17656 MSS51 mitochondrial splicing suppressor protein 51, at 240941 to 242492 15206

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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238,426 - 15204 mRNA_6836 0.57 -1.7
238,477 + 15204 mRNA_6836 0.62 -0.8
238,528 - 15204 mRNA_6836 0.66 1.4
238,821 - 2.5
238,848 - 1.6
238,855 + 0.5
238,857 + 1.5
238,859 + 0.3
238,866 + -0.5
238,993 - 1.3
239,016 - -1.6
239,025 - -0.5
239,027 + 0.6
239,040 - -0.0
239,057 - 1.4
239,058 + 2.8
239,060 + 2.3
239,073 + 2.5
239,158 + 0.6
239,159 - 0.6
239,185 - 0.2
239,201 + -0.2
239,218 - 1.0
239,275 - 1.1
239,293 - 1.7
239,323 + -0.9
239,470 - 0.4
239,622 - 15205 mRNA_6837 0.16 0.4
239,624 - 15205 mRNA_6837 0.16 0.1
239,630 + 15205 mRNA_6837 0.17 -0.3
239,770 + 15205 mRNA_6837 0.27 -1.3
240,555 + 15205 mRNA_6837 0.83 1.7
240,944 + 0.2
241,586 - 15206 mRNA_6838 0.42 0.2