Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6815

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6814: 15182 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 199925 to 200316 15182 mRNA_6815: 15183 - HMMPfam-PUB domain-PF09409,SUPERFAMILY--SSF143503, at 200696 to 201916 15183 mRNA_6816: 15184 - K02437 gcvH, GCSH glycine cleavage system H protein, at 202088 to 202810 15184

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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199,713 + 0.1
200,212 + 15182 mRNA_6814 0.73 -0.1
200,213 + 15182 mRNA_6814 0.73 3.3
200,227 + 15182 mRNA_6814 0.77 0.3
200,227 + 15182 mRNA_6814 0.77 -0.6
200,408 + -0.8
200,539 + -1.9
200,681 + 2.4
200,821 - 15183 mRNA_6815 0.10 -0.9
201,087 + 15183 mRNA_6815 0.32 -0.4
201,095 - 15183 mRNA_6815 0.33 1.1
201,116 - 15183 mRNA_6815 0.34 1.1
201,195 - 15183 mRNA_6815 0.41 1.2
201,570 + 15183 mRNA_6815 0.72 0.5
201,673 - 15183 mRNA_6815 0.80 -0.5
201,829 + 0.3
201,834 - -1.8
201,959 + 0.5
202,851 + 0.1
202,859 - 1.1
202,865 + -1.0
202,866 - -0.0
202,876 - 0.6
202,888 - 1.5
202,902 + -0.1