Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6799

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6799: 15167 - K00033 PGD, gnd, gntZ 6-phosphogluconate dehydrogenase, at 163328 to 165722 15167 mRNA_6800: 15168 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 165891 to 167581 15168

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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162,373 + 1.2
162,379 - 2.2
162,390 + -0.9
162,834 - 2.1
162,982 - 1.5
163,131 + 0.5
164,246 - 15167 mRNA_6799 0.38 1.5
165,778 + 1.1
165,791 - 2.8
165,791 - -1.6
165,812 - 1.8
165,824 - 0.4
165,825 - 0.2
165,825 - 1.1
165,828 + 0.5
165,910 - -1.3
166,306 + 15168 mRNA_6800 0.25 0.1
166,574 - 15168 mRNA_6800 0.40 0.3
166,583 + 15168 mRNA_6800 0.41 -0.0