Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6798

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6797: 15165 - BLAST Formin-like protein 3 [Rhizoctonia solani], at 156306 to 160746 15165 mRNA_6798: 15166 - Hypothetical Protein, at 161336 to 161885 15166

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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160,341 + 0.4
160,418 - -0.3
160,438 - -0.6
160,467 - -0.5
160,524 + -0.0
160,557 - 0.8
160,630 - 1.6
160,647 + 1.7
160,705 - -1.1
160,710 + 0.3
160,731 - 2.1
160,731 - 1.2
160,742 - 2.4
160,781 - 2.0
160,830 - -0.8
160,870 + -0.7
160,923 - 1.8
160,960 - 0.4
160,961 - -0.3
160,968 + 0.3
161,004 - 0.4
161,018 + -0.0
161,039 - 0.6
161,058 - -1.0
161,085 - 0.2
161,100 - 1.3
161,104 + -0.3
161,105 - 0.7
161,108 + 1.2
161,109 - 1.6
161,117 + 2.4
161,117 - -0.5
161,120 - -0.9
161,120 - -0.4
161,144 + -2.8
161,149 - -0.3
161,187 - 0.6
161,187 - 1.0
161,188 + -1.3
161,202 - 1.2
161,207 + 1.6
161,210 + -0.4
161,213 + 2.0
161,224 - -0.9
161,224 - -0.1
161,228 - -0.9
161,229 + -0.2
161,235 - 0.1
161,249 - 2.2
161,249 - -0.4
161,250 + -1.5
161,251 + 0.3
161,254 + 0.1
161,254 + 1.3
161,254 + -0.9
161,256 - 0.3
161,257 + 1.4
161,261 - 0.5
161,263 + 1.9
161,264 + -1.1
161,264 + 0.8
161,272 + -0.3
161,275 + 0.7
161,278 - 0.2
161,280 - 0.6
161,302 + 1.2
161,311 - 1.5
161,333 + 2.0
161,402 - 15166 mRNA_6798 0.12 -0.8
161,416 - 15166 mRNA_6798 0.15 -0.7
161,424 + 15166 mRNA_6798 0.16 -0.9
161,427 - 15166 mRNA_6798 0.17 1.6
161,431 - 15166 mRNA_6798 0.17 0.1
161,462 - 15166 mRNA_6798 0.23 1.0
161,565 + 15166 mRNA_6798 0.42 0.1
161,642 + 15166 mRNA_6798 0.56 1.0
161,761 - 15166 mRNA_6798 0.77 0.7
161,886 + 0.2
161,901 - -0.7
161,914 + 1.5
162,107 - 0.2
162,216 + 1.0
162,227 - 0.6
162,269 + -0.0
162,373 + 1.2
162,379 - 2.2
162,390 + -0.9
162,834 - 2.1