Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6783

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6782: 15150 - HMMPfam-Man1-Src1p-C-terminal domain-PF09402,HMMPfam-HeH/LEM domain-PF12949, at 117941 to 121019 15150 mRNA_6783: 15151 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 121260 to 121958 15151 mRNA_6784: 15152 - Hypothetical Protein, at 122179 to 122986 15152

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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121,152 - 2.2
121,162 - 0.1
121,198 + -1.9
121,203 - 0.7
121,204 + 1.1
121,206 + 0.6
121,216 - -2.0
121,221 + 0.0
121,337 - 15151 mRNA_6783 0.11 1.5
121,505 - 15151 mRNA_6783 0.35 2.3
121,526 - 15151 mRNA_6783 0.38 2.3
121,532 + 15151 mRNA_6783 0.39 0.1
121,533 + 15151 mRNA_6783 0.39 0.5
121,546 - 15151 mRNA_6783 0.41 0.8
121,556 + 15151 mRNA_6783 0.42 0.5
121,819 - 15151 mRNA_6783 0.80 1.1
121,924 + 0.8
121,962 + 0.0
122,141 - 2.1
122,180 + 0.7
122,202 + 2.8
122,682 + 15152 mRNA_6784 0.62 -0.2
122,831 - 15152 mRNA_6784 0.81 0.3