Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6772

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6771: 15139 - Hypothetical Protein, at 100994 to 101449 15139 mRNA_6772: 15140 - KOG0202 Ca2+ transporting ATPase, at 102291 to 102787 15140 mRNA_6773: 15141 - HMMPfam-Cation transporter/ATPase, N-terminus-PF00690,SUPERFAMILY--SSF81665, at 103147 to 103439 15141 mRNA_6774: 15142 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 103609 to 104047 15142

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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101,436 - 3.5
101,542 - 0.1
101,694 + 1.5
102,198 - 4.5
102,200 + 0.7
102,221 + 0.3
102,335 - -1.1
102,483 - 15140 mRNA_6772 0.39 3.3
102,628 - 15140 mRNA_6772 0.68 -2.3
102,637 + 15140 mRNA_6772 0.70 0.1
103,031 + 1.2
103,568 - 0.0
103,720 + 15142 mRNA_6774 0.25 -1.3