Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6765

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6764: 15132 - K12273 SEC66 translocation protein SEC66, at 85299 to 86536 15132 mRNA_6765: 15133 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 86718 to 88049 15133 mRNA_6766: 15134 - HMMPfam-PIG-X / PBN1-PF08320,SMART-PIG-X / PBN1-SM00780, at 88175 to 88997 15134

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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86,418 + 1.8
86,553 + 0.0
86,554 - 0.2
86,686 + -0.1
86,687 - -0.2
86,690 - -0.3
86,695 + 1.0
86,709 + 1.1
86,853 - 15133 mRNA_6765 0.10 1.6
86,979 + 15133 mRNA_6765 0.20 0.4
86,988 - 15133 mRNA_6765 0.20 0.5
86,991 + 15133 mRNA_6765 0.20 0.3
86,993 - 15133 mRNA_6765 0.21 0.5
87,122 - 15133 mRNA_6765 0.30 -2.3
87,316 - 15133 mRNA_6765 0.45 0.1
87,551 - 15133 mRNA_6765 0.63 0.5
87,708 + 15133 mRNA_6765 0.74 2.3
88,136 - -0.1
88,151 + -1.3
88,168 + 0.8