Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6751

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6750: 15118 - SUPERFAMILY--SSF47473, at 56227 to 57172 15118 mRNA_6751: 15119 - K10578 UBE2J1, NCUBE1, UBC6 ubiquitin-conjugating enzyme E2 J1, at 57250 to 58945 15119 mRNA_6752: 15120 - Hypothetical Protein, at 59165 to 59914 15120

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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56,257 - 1.4
56,312 + 2.6
56,430 + 15118 mRNA_6750 0.21 0.6
56,442 + 15118 mRNA_6750 0.23 -0.4
56,445 - 15118 mRNA_6750 0.23 -0.0
56,570 - 15118 mRNA_6750 0.36 0.2
56,576 - 15118 mRNA_6750 0.37 0.9
56,586 + 15118 mRNA_6750 0.38 -0.6
56,588 + 15118 mRNA_6750 0.38 0.9
56,589 + 15118 mRNA_6750 0.38 -1.9
56,606 + 15118 mRNA_6750 0.40 -0.6
56,627 + 15118 mRNA_6750 0.42 -0.4
56,713 - 15118 mRNA_6750 0.51 0.4
57,300 + 1.1
57,303 + -2.4
57,312 - -0.2
57,596 - 15119 mRNA_6751 0.20 2.2
57,605 + 15119 mRNA_6751 0.21 0.7
57,613 - 15119 mRNA_6751 0.21 0.3
57,617 + 15119 mRNA_6751 0.22 -0.2
57,760 - 15119 mRNA_6751 0.30 2.2
57,763 + 15119 mRNA_6751 0.30 0.2
57,763 + 15119 mRNA_6751 0.30 0.7
57,767 - 15119 mRNA_6751 0.30 1.4
57,896 - 15119 mRNA_6751 0.38 -0.1
58,173 - 15119 mRNA_6751 0.54 0.6
58,771 + 15119 mRNA_6751 0.90 1.3
59,132 - 2.2
59,529 + 15120 mRNA_6752 0.49 1.1
59,542 + 15120 mRNA_6752 0.50 -0.8
59,655 - 15120 mRNA_6752 0.65 0.3
59,676 + 15120 mRNA_6752 0.68 -1.0
59,792 - 15120 mRNA_6752 0.84 1.9
59,814 - 15120 mRNA_6752 0.87 -1.1
59,850 - 0.5
59,941 + 0.3