Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6748

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6747: 15115 - Hypothetical Protein, at 50840 to 52306 15115 mRNA_6748: 15116 - Hypothetical Protein, at 52794 to 54250 15116 mRNA_6749: 15117 - Hypothetical Protein, at 54204 to 55988 15117

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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52,031 + 15115 mRNA_6747 0.81 0.4
52,236 + 1.3
52,262 - -0.6
52,360 + -0.2
52,381 + 2.1
52,493 - 1.2
52,496 + -0.6
52,517 + -0.3
52,660 + 1.1
52,665 + 2.1
52,667 - -1.1
52,776 - -0.3
52,806 + 1.0
52,889 - 2.0
52,936 - -0.0
53,065 - 15116 mRNA_6748 0.19 -0.3
53,090 + 15116 mRNA_6748 0.20 0.2
53,405 + 15116 mRNA_6748 0.42 -0.0
53,511 - 15116 mRNA_6748 0.49 -3.9
53,538 - 15116 mRNA_6748 0.51 0.2
53,654 + 15116 mRNA_6748 0.59 2.3
53,697 - 15116 mRNA_6748 0.62 1.3
53,769 - 15116 mRNA_6748 0.67 0.1
53,815 + 15116 mRNA_6748 0.70 -0.3
53,974 + 15116 mRNA_6748 0.81 0.1
54,061 - 15116 mRNA_6748 0.87 -1.0
54,153 + -0.1
54,245 + 2.3
54,249 + -0.5
54,266 - 0.1
54,269 + 1.2
54,328 - -0.3
54,398 - 15117 mRNA_6749 0.11 -0.6
54,415 + 15117 mRNA_6749 0.12 -0.1
54,420 + 15117 mRNA_6749 0.12 0.7
54,427 - 15117 mRNA_6749 0.12 -1.2
54,430 + 15117 mRNA_6749 0.13 1.0
54,636 + 15117 mRNA_6749 0.24 1.4
54,873 - 15117 mRNA_6749 0.37 -0.9
54,981 - 15117 mRNA_6749 0.44 3.0
55,030 + 15117 mRNA_6749 0.46 0.3
55,033 - 15117 mRNA_6749 0.46 -0.3
55,094 - 15117 mRNA_6749 0.50 0.0
55,135 - 15117 mRNA_6749 0.52 1.0
55,248 - 15117 mRNA_6749 0.58 -1.5