Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6743

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6742: 15110 - Hypothetical Protein, at 41325 to 41801 15110 mRNA_6743: 15111 - K06671 STAG1_2, SCC3, IRR1 cohesin complex subunit SA-1/2, at 41896 to 46673 15111 mRNA_6744: 15112 - KOG0813 Glyoxylase, at 46801 to 48312 15112

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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40,909 + -0.4
40,911 - 2.3
40,923 - -0.2
43,833 - 15111 mRNA_6743 0.41 -3.3
46,087 - 15111 mRNA_6743 0.88 -0.9
46,122 - 15111 mRNA_6743 0.88 -0.7
46,230 - 2.2
46,423 + 0.5
46,626 - -0.9
46,636 + 0.6
46,656 - -2.3
46,684 + -1.8
46,803 + 0.9
46,901 + -0.3
47,134 + 15112 mRNA_6744 0.22 1.0
47,248 + 15112 mRNA_6744 0.30 3.4