Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6734

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6733: 15101 - KOG4412 26S proteasome regulatory complex, subunit PSMD10, at 20964 to 21791 15101 mRNA_6734: 15102 - Hypothetical Protein, at 21925 to 24629 15102 mRNA_6735: 15103 - Hypothetical Protein, at 24942 to 26366 15103

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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21,068 - 15101 mRNA_6733 0.13 -0.2
21,083 + 15101 mRNA_6733 0.14 -2.4
21,112 + 15101 mRNA_6733 0.18 2.2
21,192 + 15101 mRNA_6733 0.28 -0.1
21,204 - 15101 mRNA_6733 0.29 1.6
21,226 + 15101 mRNA_6733 0.32 0.1
21,348 - 15101 mRNA_6733 0.46 -0.2
21,502 - 15101 mRNA_6733 0.65 0.2
21,506 - 15101 mRNA_6733 0.65 -0.1
21,934 + 1.7
22,070 + -0.5
22,246 - 15102 mRNA_6734 0.12 -0.5
22,246 + 15102 mRNA_6734 0.12 -0.6
22,363 - 15102 mRNA_6734 0.16 -1.1
22,588 + 15102 mRNA_6734 0.25 -0.1
22,729 + 15102 mRNA_6734 0.30 -1.6
22,832 + 15102 mRNA_6734 0.34 -0.1
22,938 + 15102 mRNA_6734 0.37 2.2
23,225 + 15102 mRNA_6734 0.48 -0.8
23,635 + 15102 mRNA_6734 0.63 0.4
23,642 + 15102 mRNA_6734 0.63 0.5
23,867 + 15102 mRNA_6734 0.72 -0.6
23,952 - 15102 mRNA_6734 0.75 0.8
24,244 + 15102 mRNA_6734 0.86 -0.1
24,266 - 15102 mRNA_6734 0.87 1.6
24,529 - 0.3
24,538 + 1.5
24,673 - -0.5
24,701 - 0.3
24,701 - 0.3
24,702 + -0.3
24,709 - 2.1
24,722 - 1.6
24,746 - -0.1
24,749 - -1.0
24,799 - -0.3
24,825 - 3.5
24,826 + 2.0
24,852 - 2.1
24,855 - -0.4
24,894 - -0.0
24,908 - 0.3
24,984 + 0.2
24,994 + 1.4
25,126 - 15103 mRNA_6735 0.13 -0.3
25,144 - 15103 mRNA_6735 0.14 2.3
25,146 - 15103 mRNA_6735 0.14 2.7
25,148 - 15103 mRNA_6735 0.14 1.7
25,209 + 15103 mRNA_6735 0.19 0.8
25,286 - 15103 mRNA_6735 0.24 1.6
25,297 + 15103 mRNA_6735 0.25 1.3
25,313 - 15103 mRNA_6735 0.26 0.2
25,428 - 15103 mRNA_6735 0.34 0.0
25,445 - 15103 mRNA_6735 0.35 0.3
25,468 + 15103 mRNA_6735 0.37 2.7