Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6731

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6731: 15099 - BLAST putative Ran-binding protein [Rhizoctonia solani 123E], at 15699 to 18601 15099 mRNA_6732: 15100 - KOG1530 Rhodanese-related sulfurtransferase, at 19105 to 19903 15100

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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14,788 - 0.8
14,802 + 1.4
14,898 - 1.8
14,918 - 2.0
15,094 + 2.0
15,118 - 2.4
15,294 + 0.1
15,324 + 2.9
15,506 - 0.2
15,599 + -1.4
15,752 - 2.2
15,753 + 0.9
15,845 + -0.2
15,845 + 0.5
15,919 + 0.4
16,071 - 15099 mRNA_6731 0.13 0.9
16,115 + 15099 mRNA_6731 0.14 -0.5
16,119 - 15099 mRNA_6731 0.14 0.1
16,160 - 15099 mRNA_6731 0.16 0.3
16,167 + 15099 mRNA_6731 0.16 1.6
16,339 + 15099 mRNA_6731 0.22 0.2
16,433 - 15099 mRNA_6731 0.25 1.1
16,638 - 15099 mRNA_6731 0.32 -1.0
16,656 + 15099 mRNA_6731 0.33 -0.9
16,742 + 15099 mRNA_6731 0.36 0.4
16,750 - 15099 mRNA_6731 0.36 2.2
16,750 + 15099 mRNA_6731 0.36 0.1
16,766 + 15099 mRNA_6731 0.37 0.4
16,896 + 15099 mRNA_6731 0.41 1.5
17,013 + 15099 mRNA_6731 0.45 1.3
17,038 + 15099 mRNA_6731 0.46 0.3
17,067 + 15099 mRNA_6731 0.47 -0.3
17,162 + 15099 mRNA_6731 0.50 -0.3
17,356 + 15099 mRNA_6731 0.57 0.7
17,590 + 15099 mRNA_6731 0.65 0.8
17,661 - 15099 mRNA_6731 0.68 2.3
17,977 + 15099 mRNA_6731 0.78 0.3
18,184 + 15099 mRNA_6731 0.86 -0.4
18,552 - 2.0
18,970 - -1.2