Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6725

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6725: 15093 - K07575 K07575 PUA domain protein, at 176 to 1349 15093 mRNA_6726: 15094 - Hypothetical Protein, at 1736 to 3438 15094

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1 + -0.5
4 + -1.3
9 + -2.1
12 + -0.3
18 + 0.2
34 + 1.7
49 - -0.0
50 - 1.7
56 + 1.3
71 + -0.9
71 + -0.2
71 + -0.8
71 + 1.0
74 + 0.6
74 - -0.8
79 + 2.6
86 + -0.5
97 + 0.1
112 + 3.3
135 + 0.6
135 - -0.3
135 + 0.5
228 + 2.7
231 - 0.1
268 + -0.4
288 + -0.2
380 + 15093 mRNA_6725 0.17 -0.5
1,318 - -0.3
1,688 + -0.7
1,688 + -0.4
1,714 - 0.2
1,889 - 0.2
1,889 - -0.5
2,290 + 15094 mRNA_6726 0.33 1.0
2,349 - 15094 mRNA_6726 0.36 1.4