Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6685

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6684: 15052 - K04464 MAPK7 mitogen-activated protein kinase 7, at 1436143 to 1438277 15052 mRNA_6685: 15053 - Hypothetical Protein, at 1438698 to 1439183 15053 mRNA_6686: 15054 - K02875 RP-L14e, RPL14 large subunit ribosomal protein L14e, at 1439668 to 1440386 15054

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,437,796 + 15052 mRNA_6684 0.77 -0.9
1,437,923 + 15052 mRNA_6684 0.83 -1.1
1,438,215 - 1.4
1,438,226 + 1.4
1,438,365 + -0.5
1,438,381 - -0.1
1,438,385 - -0.5
1,438,392 + -0.0
1,438,519 - -1.1
1,438,520 - 1.7
1,438,522 - 0.1
1,438,637 - -0.1
1,438,792 + 15053 mRNA_6685 0.19 0.0
1,439,119 + 15053 mRNA_6685 0.87 0.8
1,439,127 - 15053 mRNA_6685 0.88 0.2
1,439,238 - -0.7