Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6670

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6669: 15037 - K03564 BCP, PRXQ, DOT5 peroxiredoxin Q/BCP, at 1407006 to 1408136 15037 mRNA_6670: 15038 - K03676 grxC, GLRX, GLRX2 glutaredoxin 3, at 1408478 to 1409380 15038 mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1410209 to 1413905 15039

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,407,538 - 15037 mRNA_6669 0.47 0.2
1,407,553 + 15037 mRNA_6669 0.48 0.3
1,407,957 - 15037 mRNA_6669 0.84 0.6
1,408,414 + -0.6
1,408,720 - 15038 mRNA_6670 0.27 0.5
1,408,853 + 15038 mRNA_6670 0.42 0.7
1,408,992 - 15038 mRNA_6670 0.57 0.9
1,409,295 - -0.2
1,409,307 + 0.2
1,409,440 - 0.5
1,409,452 + 0.4
1,409,460 - 1.3
1,409,578 - 4.5
1,409,619 - 2.4
1,409,730 - 1.6
1,409,738 + 0.9
1,409,745 - -0.3
1,409,863 + 0.2
1,409,871 + 1.8
1,409,871 + 0.8
1,409,873 - 0.4
1,409,876 - -0.6
1,409,890 - 0.4
1,409,895 + -0.4
1,409,902 - -1.1
1,409,909 + -0.1
1,410,056 - 1.2
1,410,182 - -0.7
1,410,184 - -0.6
1,410,187 + -0.6
1,410,208 - -0.7
1,410,213 - 0.6
1,410,220 + 1.7
1,410,295 - 0.3
1,410,314 - 0.1