Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6656

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1358691 to 1359757 15023 mRNA_6656: 15024 - KOG1674 Cyclin, at 1360120 to 1362447 15024

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,359,380 + 15023 mRNA_6655 0.65 0.0
1,359,479 - 15023 mRNA_6655 0.74 1.3
1,359,515 + 15023 mRNA_6655 0.77 0.7
1,359,624 - 15023 mRNA_6655 0.87 -0.1
1,359,639 - 15023 mRNA_6655 0.89 -0.7
1,359,644 - 15023 mRNA_6655 0.89 0.6
1,359,650 - 15023 mRNA_6655 0.90 0.6
1,359,840 - 0.0
1,359,851 - 0.4
1,359,861 - 2.4
1,359,869 - 3.0
1,359,881 + 0.8
1,359,945 - 1.1
1,360,009 - 0.1
1,360,011 + -0.1
1,360,044 + -0.1
1,360,398 - 15024 mRNA_6656 0.12 -1.7
1,360,438 - 15024 mRNA_6656 0.14 0.1
1,360,563 - 15024 mRNA_6656 0.19 1.0
1,360,994 + 15024 mRNA_6656 0.38 -1.9
1,362,299 - 3.2
1,362,408 + 1.2
1,362,441 + 0.1
1,362,725 + 1.0
1,362,726 + 0.2
1,362,855 + 1.0
1,362,865 - -0.7
1,362,870 + -2.4
1,362,884 + -0.2
1,363,016 + 0.4
1,363,019 - 1.1
1,363,038 + 2.6
1,363,044 - 3.9
1,363,048 + 1.6
1,363,049 - 0.1
1,363,062 - 1.4
1,363,175 + -1.1
1,363,182 - 0.6
1,363,184 - 0.2
1,363,187 + 2.3
1,363,190 - 0.7
1,363,191 + -1.2
1,363,211 + -0.3
1,363,324 - 1.3
1,363,331 - 0.2
1,363,346 + 1.5
1,363,353 + 3.2
1,363,357 - 0.5
1,363,374 + -0.3
1,363,429 - 2.4
1,363,445 - -0.5
1,363,446 - -0.3
1,363,446 + 0.1