Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6630

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6629: 14997 - KOG0538 Glycolate oxidase, at 1287348 to 1288864 14997 mRNA_6630: 14998 - KOG0463 GTP-binding protein GP-1, at 1289134 to 1291878 14998 mRNA_6631: 14999 - K11429 SUV420H histone-lysine N-methyltransferase SUV420H, at 1292866 to 1293273 14999

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,288,171 - 14997 mRNA_6629 0.54 0.8
1,288,262 + 14997 mRNA_6629 0.60 0.4
1,288,371 + 14997 mRNA_6629 0.67 -0.2
1,288,703 + 14997 mRNA_6629 0.89 -2.9
1,288,809 + 0.5
1,288,959 - 0.5
1,289,075 - 1.6
1,289,345 + -0.8
1,289,384 - 0.3
1,289,387 + 1.0
1,289,388 + -0.1
1,289,508 - 14998 mRNA_6630 0.14 -0.2
1,289,677 + 14998 mRNA_6630 0.20 2.3
1,289,846 + 14998 mRNA_6630 0.26 -0.6
1,290,020 - 14998 mRNA_6630 0.32 0.6
1,290,020 + 14998 mRNA_6630 0.32 0.1
1,290,155 + 14998 mRNA_6630 0.37 -1.0
1,290,300 + 14998 mRNA_6630 0.42 1.1
1,290,408 + 14998 mRNA_6630 0.46 -0.2
1,290,431 - 14998 mRNA_6630 0.47 0.6
1,290,547 + 14998 mRNA_6630 0.51 -0.7
1,291,027 + 14998 mRNA_6630 0.69 -0.4
1,291,164 - 14998 mRNA_6630 0.74 -0.4
1,291,172 + 14998 mRNA_6630 0.74 0.6
1,291,180 - 14998 mRNA_6630 0.75 3.3
1,291,330 + 14998 mRNA_6630 0.80 1.4
1,291,354 + 14998 mRNA_6630 0.81 0.0
1,291,448 + 14998 mRNA_6630 0.84 0.1
1,291,485 - 14998 mRNA_6630 0.86 0.5
1,291,490 + 14998 mRNA_6630 0.86 1.9
1,291,610 - 1.5
1,291,626 + -0.4
1,291,629 + 0.6
1,291,794 + 0.5
1,291,880 + -1.2
1,292,029 - -0.3
1,292,047 - -1.0
1,292,059 - 0.2
1,292,060 - -1.0
1,292,338 + 1.2
1,292,341 + 0.3
1,292,343 - -0.3
1,292,411 + -1.9
1,292,415 + -0.4
1,292,463 - 0.5
1,292,475 - 0.3
1,292,501 - -0.1
1,292,515 - 1.2
1,292,592 - 0.3
1,292,646 - 0.0
1,292,693 - -0.4
1,292,846 - -0.3