Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6624

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6623: 14991 - Hypothetical Protein, at 1272208 to 1273680 14991 mRNA_6624: 14992 - Hypothetical Protein, at 1274001 to 1275291 14992 mRNA_6625: 14993 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1275410 to 1278515 14993

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,273,099 + 14991 mRNA_6623 0.60 -0.6
1,273,234 + 14991 mRNA_6623 0.70 -0.9
1,273,574 - -0.3
1,273,574 + 0.9
1,273,839 + 0.7
1,274,028 - 1.7
1,274,059 + -0.9
1,274,062 + -0.0
1,274,062 + 0.4
1,274,097 - 1.2
1,274,131 - 14992 mRNA_6624 0.10 2.4
1,274,196 + 14992 mRNA_6624 0.15 2.2
1,274,247 + 14992 mRNA_6624 0.19 0.8
1,274,304 - 14992 mRNA_6624 0.23 0.3
1,274,610 - 14992 mRNA_6624 0.47 0.7
1,274,629 + 14992 mRNA_6624 0.49 0.7
1,274,636 - 14992 mRNA_6624 0.49 1.5
1,274,638 + 14992 mRNA_6624 0.49 0.3
1,274,708 - 14992 mRNA_6624 0.55 0.1
1,274,777 - 14992 mRNA_6624 0.60 0.7
1,274,846 + 14992 mRNA_6624 0.65 1.8
1,275,033 - 14992 mRNA_6624 0.80 0.3
1,275,092 + 14992 mRNA_6624 0.85 -0.1
1,275,175 - 0.8
1,275,215 + 0.6
1,275,223 + 1.1
1,275,312 + 1.1
1,275,326 - 1.9
1,275,340 + -0.1
1,275,345 + 1.4
1,275,515 + -0.5
1,275,536 - -0.0
1,275,658 + -1.0
1,276,072 + 14993 mRNA_6625 0.21 -0.2
1,276,198 + 14993 mRNA_6625 0.25 1.4
1,276,205 + 14993 mRNA_6625 0.26 0.9