Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6621

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6620: 14988 - K02935 RP-L7, MRPL12, rplL large subunit ribosomal protein L7/L12, at 1267271 to 1267860 14988 mRNA_6621: 14989 - Hypothetical Protein, at 1268421 to 1270121 14989 mRNA_6622: 14990 - Hypothetical Protein, at 1270979 to 1271740 14990

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,268,196 - 2.1
1,268,209 + 1.2
1,268,216 - -0.9
1,268,249 - -0.7
1,268,385 - -0.8
1,268,498 - 0.9
1,268,513 + 1.0
1,268,997 - 14989 mRNA_6621 0.34 0.9
1,269,147 + 14989 mRNA_6621 0.43 -0.1
1,269,158 - 14989 mRNA_6621 0.43 0.0
1,269,424 + 14989 mRNA_6621 0.59 -0.4
1,269,431 + 14989 mRNA_6621 0.59 -1.7
1,269,802 - 14989 mRNA_6621 0.81 -1.5
1,269,811 + 14989 mRNA_6621 0.82 1.4
1,269,829 - 14989 mRNA_6621 0.83 0.1
1,270,023 - -1.7
1,270,233 - -0.4