Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6618

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6618: 14986 - KOG0627 Heat shock transcription factor, at 1261222 to 1263169 14986

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,260,246 - -0.1
1,260,258 + -0.1
1,260,307 + 0.2
1,260,320 + -0.1
1,260,351 + -0.6
1,260,397 - -0.6
1,260,409 + 0.3
1,260,461 + -0.9
1,260,565 - 0.5
1,260,577 - 1.2
1,260,583 - 1.9
1,260,585 + 2.3
1,260,594 + -2.0
1,260,597 + -0.3
1,260,685 + 0.3
1,260,688 - 0.6
1,260,697 - 0.6
1,260,698 - 1.0
1,260,706 + -0.4
1,260,711 - -1.6
1,260,714 + -0.3
1,260,719 + 0.1
1,260,722 + 1.4
1,260,723 - 2.0
1,260,724 - -0.3
1,260,726 + 0.2
1,260,734 + -1.5
1,260,735 + -2.7
1,260,742 + 1.2
1,260,744 - 0.9
1,260,748 - 0.6
1,260,749 + 1.2
1,260,752 + 0.0
1,260,755 - -0.1
1,260,757 - -2.1
1,260,759 + -0.0
1,260,760 - 1.0
1,260,761 + 0.5
1,260,767 - 0.6
1,260,769 - 1.8
1,260,770 - 0.9
1,260,772 + -0.9
1,260,774 - 1.1
1,260,780 + -0.3
1,260,784 - -1.1
1,260,879 + 1.4
1,260,880 - 1.8
1,260,884 - -0.1
1,260,894 - -0.7
1,260,908 - 3.0
1,260,911 + 0.9
1,260,919 + 1.5
1,260,924 - 1.1
1,260,933 - -1.1
1,260,937 - -1.8
1,261,052 + -0.0
1,261,074 - -0.1
1,261,213 - 2.0
1,261,219 + 1.8
1,261,251 + 0.7
1,261,542 + 14986 mRNA_6618 0.16 2.8
1,261,624 + 14986 mRNA_6618 0.21 0.1
1,261,797 - 14986 mRNA_6618 0.30 -1.3
1,262,269 + 14986 mRNA_6618 0.54 0.2
1,262,361 - 14986 mRNA_6618 0.58 1.3
1,262,363 + 14986 mRNA_6618 0.59 -2.1
1,262,385 - 14986 mRNA_6618 0.60 -1.4
1,262,844 - 14986 mRNA_6618 0.83 2.9
1,262,859 - 14986 mRNA_6618 0.84 0.5
1,263,341 + -0.3
1,263,475 - 0.5
1,263,573 + -0.0
1,263,592 + -1.4
1,263,595 + 1.2
1,263,705 - 0.2
1,263,723 + -0.2
1,263,734 - 1.7
1,263,752 + -0.0
1,263,755 - 1.3
1,264,006 - -0.1
1,264,023 + -0.1
1,264,023 + -0.6
1,264,033 - 0.1
1,264,037 - -0.3
1,264,044 + -0.3
1,264,159 + -0.2