Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6609

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6608: 14976 - HMMPfam-Yqey-like protein-PF09424,SUPERFAMILY--SSF89095, at 1235568 to 1236163 14976 mRNA_6609: 14977 - KOG1232 Proteins containing the FAD binding domain, at 1236785 to 1239365 14977 mRNA_6610: 14978 - BLAST related to MSL5-branch point bridging protein [Sporis..., at 1239560 to 1240604 14978

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,235,831 + 14976 mRNA_6608 0.44 -0.3
1,236,345 - -1.2
1,236,486 + 2.2
1,236,609 - 1.4
1,236,619 + -0.8
1,236,638 + 0.0
1,236,647 + 0.6
1,236,677 - -1.5
1,236,684 - -3.0
1,236,689 + -1.6
1,236,701 - 1.0
1,236,701 + 0.2
1,236,725 + -1.2
1,236,732 + 0.1
1,237,709 + 14977 mRNA_6609 0.36 -0.4
1,237,899 + 14977 mRNA_6609 0.43 0.4
1,238,580 + 14977 mRNA_6609 0.70 -1.2
1,238,650 + 14977 mRNA_6609 0.72 2.3
1,239,011 + 14977 mRNA_6609 0.86 -0.4
1,239,297 + -0.3
1,239,298 - -1.0
1,239,299 + -0.6
1,239,329 + 1.2
1,239,744 - 14978 mRNA_6610 0.18 -0.6
1,239,903 + 14978 mRNA_6610 0.33 1.4