Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6587

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6587: 14955 - SUPERFAMILY--SSF57184, at 1165950 to 1167130 14955 mRNA_6588: 14956 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 1167878 to 1169516 14956

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,164,961 - 0.3
1,165,047 + -0.3
1,165,175 + 0.3
1,165,178 - -0.0
1,165,293 - -0.1
1,165,305 - 0.5
1,165,307 + 0.1
1,165,316 - 0.2
1,165,325 - 1.3
1,165,328 + -0.8
1,165,330 + -1.8
1,165,330 + -1.3
1,165,333 - -0.8
1,165,336 + 0.6
1,165,339 + -3.5
1,165,342 - 2.6
1,165,344 - 0.1
1,165,347 + 3.3
1,165,356 + -0.7
1,165,362 - 1.5
1,165,363 + -1.0
1,165,365 - 0.4
1,165,365 + 0.3
1,165,374 - 1.0
1,165,378 + -0.7
1,165,380 + 1.7
1,165,382 - -0.0
1,165,386 - -0.1
1,165,387 - 0.8
1,165,400 + -1.1
1,165,418 + 0.7
1,165,432 + 0.7
1,165,433 + -0.1
1,165,440 - 1.2
1,165,462 + 1.2
1,165,470 + 1.5
1,165,472 - -0.2
1,165,491 - 2.1
1,165,512 + 0.5
1,165,522 + 2.6
1,165,524 + -1.9
1,165,528 - -1.3
1,165,529 - -1.5
1,165,532 - 1.4
1,165,539 + 1.3
1,165,547 - -1.4
1,165,558 + -0.4
1,165,636 + 0.6
1,165,661 + 0.4
1,165,662 - -2.6
1,165,718 - 4.9
1,165,734 - -0.5
1,165,814 - 2.6
1,166,206 + 14955 mRNA_6587 0.22 -1.6
1,166,352 - 14955 mRNA_6587 0.34 -2.5
1,166,357 - 14955 mRNA_6587 0.34 -0.2
1,166,363 + 14955 mRNA_6587 0.35 1.9
1,166,452 + 14955 mRNA_6587 0.43 -2.4
1,166,490 + 14955 mRNA_6587 0.46 1.6
1,166,570 + 14955 mRNA_6587 0.52 -0.0
1,166,699 - 14955 mRNA_6587 0.63 -1.2
1,166,779 + 14955 mRNA_6587 0.70 1.6
1,167,000 - 14955 mRNA_6587 0.89 -0.5
1,167,097 - -0.9
1,167,099 + -1.4
1,167,241 + 0.3
1,167,298 - -0.7
1,167,324 - -0.2
1,167,566 - 1.7
1,167,790 + 1.2