Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6518

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6517: 14885 - K12879 THOC2 THO complex subunit 2, at 975368 to 982291 14885 mRNA_6518: 14886 - K05712 mhpA 3-(3-hydroxy-phenyl)propionate hydroxylase, at 982415 to 984966 14886 mRNA_6519: 14887 - K11806 WDSOF1 WD repeat and SOF domain-containing protein 1, at 985258 to 987431 14887

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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981,565 - 14885 mRNA_6517 0.90 0.2
982,082 - 0.5
982,684 + 14886 mRNA_6518 0.11 0.9
982,845 + 14886 mRNA_6518 0.17 0.3
983,458 + 14886 mRNA_6518 0.41 -0.6
983,573 - 14886 mRNA_6518 0.45 0.2
983,575 + 14886 mRNA_6518 0.45 -0.3
983,907 + 14886 mRNA_6518 0.58 -1.3
984,256 - 14886 mRNA_6518 0.72 0.7
984,283 - 14886 mRNA_6518 0.73 1.8
984,416 + 14886 mRNA_6518 0.78 -0.4
984,465 + 14886 mRNA_6518 0.80 1.8
984,749 + -3.0
984,750 + 0.2
984,753 - -1.6
984,756 + 0.7
985,016 - -0.2
985,029 + -0.0
985,030 + 1.2
985,031 - -0.5
985,042 - 1.8
985,057 + -0.7
985,057 - -0.3
985,069 + 0.6
985,084 - 0.8
985,088 - -1.0
985,112 + -0.1
985,172 + -0.2
985,183 - -0.0
985,205 - -0.4
985,208 + -0.6
985,241 + 0.4