Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6516

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6515: 14883 - K16578 CLASP1_2 CLIP-associating protein 1/2, at 970088 to 973817 14883 mRNA_6516: 14884 - Hypothetical Protein, at 974162 to 975105 14884 mRNA_6517: 14885 - K12879 THOC2 THO complex subunit 2, at 975368 to 982291 14885

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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973,425 - 14883 mRNA_6515 0.89 0.5
973,434 + 14883 mRNA_6515 0.90 1.2
973,466 + 1.7
973,570 + -0.5
973,571 + 0.3
973,586 + 0.3
973,602 - -0.9
973,697 - 0.7
973,718 + 0.3
973,723 + 0.3
973,744 - -0.1
973,897 - 0.3
973,913 - -0.4
973,914 + 0.2
974,056 + 0.2
974,063 - -0.0
974,205 + -0.0
974,485 + 14884 mRNA_6516 0.34 -3.2
974,624 + 14884 mRNA_6516 0.49 -0.0
974,640 + 14884 mRNA_6516 0.51 -0.3
975,058 - 0.3
975,295 - 0.8
975,309 - 0.8
975,333 + 0.1
975,491 - -0.8
976,057 - -0.8