Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6510

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6509: 14877 - K12494 PSD PH and SEC7 domain-containing protein, at 950278 to 955327 14877 mRNA_6510: 14878 - K00818 E2.6.1.11, argD acetylornithine aminotransferase, at 955523 to 957319 14878 mRNA_6511: 14879 - KOG1061 Vesicle coat complex AP-1/AP-2/AP-4, beta subunit, at 957462 to 960234 14879

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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954,607 - 14877 mRNA_6509 0.86 1.1
954,885 + 0.4
955,203 + -1.1
955,323 - 0.7
955,325 + 1.0
955,358 - 0.4
955,636 - -1.0
955,637 + 0.2
955,680 - -0.7
955,973 + 14878 mRNA_6510 0.25 1.8
955,987 - 14878 mRNA_6510 0.26 0.0
956,677 - 14878 mRNA_6510 0.64 -0.3
956,980 - 14878 mRNA_6510 0.81 0.0
956,982 - 14878 mRNA_6510 0.81 -0.0
957,092 - 14878 mRNA_6510 0.87 0.1
957,095 - 14878 mRNA_6510 0.87 -0.4
957,116 - 14878 mRNA_6510 0.89 -2.0
957,116 + 14878 mRNA_6510 0.89 -1.4
957,388 - -0.8
957,390 + -0.6
957,390 - -0.6
957,397 - -1.0
957,404 + 1.3
957,415 - -0.7
957,580 + 2.1
958,293 + 14879 mRNA_6511 0.30 1.1