Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6470

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6469: 14837 - K10625 UBR1 E3 ubiquitin-protein ligase UBR1, at 858043 to 864348 14837 mRNA_6470: 14838 - Hypothetical Protein, at 864745 to 865870 14838 mRNA_6471: 14839 - KOG0806 Carbon-nitrogen hydrolase, at 866226 to 867912 14839

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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863,932 - -1.2
863,938 - 0.9
864,093 - 0.4
864,093 - 0.8
864,182 + -1.7
864,385 - 3.1
864,401 + -1.3
864,685 + 1.6
864,793 + -0.0
864,842 + 0.4
864,869 - 14838 mRNA_6470 0.11 0.0
864,977 + 14838 mRNA_6470 0.21 -0.2
864,979 + 14838 mRNA_6470 0.21 1.2
864,986 - 14838 mRNA_6470 0.21 0.5
865,031 + 14838 mRNA_6470 0.25 -0.4
865,139 + 14838 mRNA_6470 0.35 1.9
865,170 + 14838 mRNA_6470 0.38 0.0
865,302 - 14838 mRNA_6470 0.49 0.0
865,573 - 14838 mRNA_6470 0.74 -0.1
865,664 + 14838 mRNA_6470 0.82 -1.1
865,695 + 14838 mRNA_6470 0.84 0.3
865,760 + -0.9
865,873 + 0.7
866,120 - -0.3
866,129 - 2.2
866,143 - 1.0
866,179 - 1.2
866,273 - 1.4
866,341 + -0.5
866,343 - 1.1
866,344 + -0.6
866,431 + 14839 mRNA_6471 0.12 -0.6
866,438 - 14839 mRNA_6471 0.13 -3.1
866,438 - 14839 mRNA_6471 0.13 -0.6
866,469 + 14839 mRNA_6471 0.14 2.5
866,608 + 14839 mRNA_6471 0.23 0.6
866,752 - 14839 mRNA_6471 0.31 0.7
866,769 + 14839 mRNA_6471 0.32 0.5