Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6465

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6464: 14832 - KOG1609 Protein involved in mRNA turnover and stability, at 845418 to 846912 14832 mRNA_6465: 14833 - Hypothetical Protein, at 847070 to 847704 14833 mRNA_6466: 14834 - Hypothetical Protein, at 848394 to 849782 14834

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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846,116 + 14832 mRNA_6464 0.47 0.7
846,203 - 14832 mRNA_6464 0.53 -0.8
846,484 - 14832 mRNA_6464 0.71 -0.2
846,502 - 14832 mRNA_6464 0.73 0.1
846,511 + 14832 mRNA_6464 0.73 1.4
846,635 - 14832 mRNA_6464 0.81 0.5
846,650 - 14832 mRNA_6464 0.82 3.4
846,653 - 14832 mRNA_6464 0.83 0.4
846,661 + 14832 mRNA_6464 0.83 1.0
846,675 + 14832 mRNA_6464 0.84 0.7
846,806 + -0.1
846,811 + 0.1
846,828 + 2.8
847,056 + 2.0
847,494 + 14833 mRNA_6465 0.67 1.1
847,494 - 14833 mRNA_6465 0.67 -0.8
847,530 + 14833 mRNA_6465 0.72 1.9
847,575 + 14833 mRNA_6465 0.80 -0.9
847,634 + 14833 mRNA_6465 0.89 1.1
847,820 + 0.7
847,867 - -0.4
847,980 + 0.3
847,993 - 0.4
848,084 + 0.7
848,110 - 0.7
848,135 + -0.2
848,136 - -1.9
848,144 + -1.3
848,271 - 0.0
848,388 - -0.1
848,416 + 1.8
848,430 + 1.2
848,556 - 14834 mRNA_6466 0.12 -2.5
848,559 - 14834 mRNA_6466 0.12 1.6
848,650 - 14834 mRNA_6466 0.18 0.0
848,674 - 14834 mRNA_6466 0.20 0.4