Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6450

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818867 to 821319 14817 mRNA_6450: 14818 - Hypothetical Protein, at 821969 to 822682 14818 mRNA_6451: 14819 - Hypothetical Protein, at 823535 to 824941 14819

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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821,069 - 14817 mRNA_6449 0.90 0.5
821,090 - -1.4
821,099 + 2.2
821,835 + 0.2
821,884 - 0.9
821,928 - 0.3
821,984 + 0.5
822,261 + 14818 mRNA_6450 0.41 -0.1
822,378 + 14818 mRNA_6450 0.57 0.3
822,380 + 14818 mRNA_6450 0.58 1.2
822,392 - 14818 mRNA_6450 0.59 0.7
822,392 - 14818 mRNA_6450 0.59 1.0
822,433 + 14818 mRNA_6450 0.65 0.3
822,557 - 14818 mRNA_6450 0.82 0.6
822,567 + 14818 mRNA_6450 0.84 -1.0
822,570 - 14818 mRNA_6450 0.84 -0.3
822,583 + 14818 mRNA_6450 0.86 -0.5
822,601 + 14818 mRNA_6450 0.89 0.2
822,680 - 0.5
822,689 + 0.2
822,713 - -0.1
822,718 + 2.4
822,830 - 1.5
822,975 - -0.9
823,000 - 0.7
823,292 - -0.8
823,473 + 0.3
823,589 + 0.3