Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6448

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6447: 14815 - Hypothetical Protein, at 816253 to 817256 14815 mRNA_6448: 14816 - HMMPfam-F-box-like-PF12937, at 817584 to 818438 14816 mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818867 to 821319 14817

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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816,639 + 14815 mRNA_6447 0.38 -0.3
816,944 + 14815 mRNA_6447 0.69 2.1
817,012 + 14815 mRNA_6447 0.76 0.4
817,058 + 14815 mRNA_6447 0.80 -0.1
817,060 - 14815 mRNA_6447 0.80 2.0
817,249 - -0.4
817,272 - 1.0
817,393 - 1.2
817,394 - 0.2
817,608 + -1.4
817,744 - 14816 mRNA_6448 0.19 -1.0
818,305 + 14816 mRNA_6448 0.84 -0.9
818,492 - -1.3
818,538 - 0.8
818,651 + 2.0
818,790 - 0.5
818,859 - -0.6
818,917 - -0.1
819,025 + 0.4
819,050 + 0.9
819,184 - 14817 mRNA_6449 0.13 -0.3
819,262 - 14817 mRNA_6449 0.16 3.2
819,262 + 14817 mRNA_6449 0.16 0.1
819,317 - 14817 mRNA_6449 0.18 -0.6
819,352 - 14817 mRNA_6449 0.20 2.7