Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6445

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6444: 14812 - Hypothetical Protein, at 808406 to 809831 14812 mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810637 to 814255 14813 mRNA_6446: 14814 - Hypothetical Protein, at 814402 to 816229 14814

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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809,998 - 0.2
810,031 - 0.1
810,202 + 0.9
810,226 - -0.7
810,488 - -0.7
810,541 - -0.9
810,889 - -0.5
810,934 + -1.4
810,989 - -1.2
811,032 - 14813 mRNA_6445 0.11 -0.3
811,040 + 14813 mRNA_6445 0.11 -2.2
811,074 - 14813 mRNA_6445 0.12 0.8
811,090 + 14813 mRNA_6445 0.13 2.4
811,238 + 14813 mRNA_6445 0.17 0.2
811,239 - 14813 mRNA_6445 0.17 0.5
811,388 + 14813 mRNA_6445 0.21 2.2
811,525 + 14813 mRNA_6445 0.25 3.2
811,609 + 14813 mRNA_6445 0.27 1.9
811,722 - 14813 mRNA_6445 0.30 -0.1
811,878 + 14813 mRNA_6445 0.34 -0.1
811,921 - 14813 mRNA_6445 0.35 0.6
812,121 - 14813 mRNA_6445 0.41 1.6
812,124 - 14813 mRNA_6445 0.41 -1.1
812,133 - 14813 mRNA_6445 0.41 -0.0
812,142 + 14813 mRNA_6445 0.42 0.4
812,142 + 14813 mRNA_6445 0.42 -1.4
812,563 - 14813 mRNA_6445 0.53 1.1
812,625 - 14813 mRNA_6445 0.55 1.5
812,704 - 14813 mRNA_6445 0.57 0.2
812,740 + 14813 mRNA_6445 0.58 0.3
812,869 + 14813 mRNA_6445 0.62 0.2
813,001 - 14813 mRNA_6445 0.65 0.2
813,327 - 14813 mRNA_6445 0.74 1.7
813,631 + 14813 mRNA_6445 0.83 -0.5
813,643 + 14813 mRNA_6445 0.83 -0.5
813,655 - 14813 mRNA_6445 0.83 -0.1
813,664 - 14813 mRNA_6445 0.84 -0.6
813,810 - 14813 mRNA_6445 0.88 0.1
813,890 + 14813 mRNA_6445 0.90 -1.1
813,922 + 1.0
813,929 + 1.0
813,989 - -1.3
814,010 + 1.8
814,041 - -0.1
814,055 - 0.4
814,072 + 1.3
814,076 - 0.2
814,196 - 2.9
814,209 + 0.2
814,211 + -0.0
814,222 + -1.0
814,317 - -1.3
814,335 + 1.0
814,357 + 2.2
814,364 - 0.1
814,487 - 0.2
814,500 - 1.8
814,717 - 14814 mRNA_6446 0.17 0.4
814,718 + 14814 mRNA_6446 0.17 0.5
814,742 - 14814 mRNA_6446 0.19 0.9
814,796 + 14814 mRNA_6446 0.22 1.2
814,881 - 14814 mRNA_6446 0.26 2.0
814,915 - 14814 mRNA_6446 0.28 0.5
814,920 + 14814 mRNA_6446 0.28 2.0
814,977 - 14814 mRNA_6446 0.31 -0.6
815,172 - 14814 mRNA_6446 0.42 -0.4
815,247 + 14814 mRNA_6446 0.46 -2.1