Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6428

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773204 to 778326 14795 mRNA_6428: 14796 - KOG2208 Vigilin, at 779181 to 783068 14796

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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778,240 + -0.5
778,263 + -0.0
778,290 + 0.3
778,647 - 2.6
778,742 + 1.6
778,785 + 0.2
778,861 + -0.3
778,883 - 1.0
778,883 - 1.1
778,909 - 2.2
778,913 + 2.6
779,053 - -0.5
779,541 + 1.1
779,809 + 14796 mRNA_6428 0.16 -0.7
780,038 + 14796 mRNA_6428 0.22 -0.0
780,040 - 14796 mRNA_6428 0.22 -1.6
780,156 - 14796 mRNA_6428 0.25 1.6
780,248 - 14796 mRNA_6428 0.27 0.8
780,273 + 14796 mRNA_6428 0.28 0.6
780,389 - 14796 mRNA_6428 0.31 -0.0
780,422 + 14796 mRNA_6428 0.32 1.1
780,499 - 14796 mRNA_6428 0.34 -0.7
780,654 - 14796 mRNA_6428 0.38 -0.8
780,666 - 14796 mRNA_6428 0.38 0.5
780,945 - 14796 mRNA_6428 0.45 0.7
781,097 - 14796 mRNA_6428 0.49 0.7
781,104 + 14796 mRNA_6428 0.49 -0.1
781,126 + 14796 mRNA_6428 0.50 0.9
781,245 + 14796 mRNA_6428 0.53 -0.2
781,261 + 14796 mRNA_6428 0.53 1.5
781,261 + 14796 mRNA_6428 0.53 3.5
781,443 + 14796 mRNA_6428 0.58 1.8
781,536 + 14796 mRNA_6428 0.61 0.8
781,548 + 14796 mRNA_6428 0.61 -0.6
781,567 - 14796 mRNA_6428 0.61 0.8
781,573 + 14796 mRNA_6428 0.62 2.4
781,606 + 14796 mRNA_6428 0.62 1.5
781,661 - 14796 mRNA_6428 0.64 -0.6
781,701 - 14796 mRNA_6428 0.65 -0.8
781,795 - 14796 mRNA_6428 0.67 0.2
781,888 + 14796 mRNA_6428 0.70 1.5
782,021 - 14796 mRNA_6428 0.73 0.2
782,024 + 14796 mRNA_6428 0.73 -0.8
782,143 + 14796 mRNA_6428 0.76 0.1
782,268 - 14796 mRNA_6428 0.79 0.0
782,387 + 14796 mRNA_6428 0.82 -2.1
782,389 - 14796 mRNA_6428 0.83 -0.3
782,428 - 14796 mRNA_6428 0.84 0.6
783,050 - -1.0
783,168 - 0.3
783,195 - 2.5
783,295 - 0.0
783,483 - 0.3
783,489 + 2.0
783,500 + 1.7
783,601 - 0.8
783,618 + 0.1
783,628 + 1.1
783,630 - 1.0
783,632 - -0.1
783,639 + 1.4
783,640 + -0.0
783,647 + 1.9
783,664 + -0.4
783,664 + 1.0
783,674 + 0.7
783,676 - 0.4
783,679 + -1.3
783,701 + 2.1
783,777 - 2.0
783,812 - -0.8
783,924 - 0.1
783,947 - 0.2
783,949 - 1.3
783,954 + 1.9
783,979 + -0.5
783,988 - 0.3
784,012 - 1.0
784,055 + 0.9