Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6427

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6426: 14794 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 770724 to 773097 14794 mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773204 to 778326 14795 mRNA_6428: 14796 - KOG2208 Vigilin, at 779181 to 783068 14796

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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773,185 + 2.4
773,304 - -1.2
773,440 - 0.2
773,460 + -0.2
773,547 - 1.6
774,377 - 14795 mRNA_6427 0.23 0.2
774,483 - 14795 mRNA_6427 0.25 -1.0
774,604 + 14795 mRNA_6427 0.27 0.4
774,616 - 14795 mRNA_6427 0.28 2.0
774,660 + 14795 mRNA_6427 0.28 0.4
774,663 - 14795 mRNA_6427 0.28 0.6
775,347 - 14795 mRNA_6427 0.42 -0.8
775,821 + 14795 mRNA_6427 0.51 1.2
776,386 + 14795 mRNA_6427 0.62 -0.7
776,392 + 14795 mRNA_6427 0.62 -0.4
776,477 + 14795 mRNA_6427 0.64 2.0
776,491 + 14795 mRNA_6427 0.64 -0.1
776,795 + 14795 mRNA_6427 0.70 0.4
776,935 + 14795 mRNA_6427 0.73 0.9
776,983 + 14795 mRNA_6427 0.74 -2.1
777,292 + 14795 mRNA_6427 0.80 -0.8
777,298 - 14795 mRNA_6427 0.80 0.7
777,520 + 14795 mRNA_6427 0.84 2.0
777,574 + 14795 mRNA_6427 0.85 2.1
777,790 + 14795 mRNA_6427 0.90 0.3
777,834 + 0.3
778,240 + -0.5
778,263 + -0.0
778,290 + 0.3
778,647 - 2.6
778,742 + 1.6
778,785 + 0.2
778,861 + -0.3
778,883 - 1.0
778,883 - 1.1
778,909 - 2.2
778,913 + 2.6
779,053 - -0.5