Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6422

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6420: 14788 - K14263 BNA7 kynurenine formamidase, at 764043 to 765055 14788 mRNA_6421: 14789 - SUPERFAMILY--SSF82199, at 765271 to 766029 14789 mRNA_6422: 14790 - KOG2084 Predicted histone tail methylase containing SET domain, at 766030 to 767975 14790 mRNA_6423: 14791 - Hypothetical Protein, at 768388 to 769029 14791

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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765,047 - 1.0
765,100 - -0.6
765,101 - 1.6
765,124 - -0.7
765,129 + 2.9
765,131 - 0.0
765,132 - 1.3
765,141 - -0.5
765,155 + 0.9
765,251 + -1.6
765,289 + -0.5
765,402 - 14789 mRNA_6421 0.17 2.3
765,561 - 14789 mRNA_6421 0.38 0.4
765,684 + 14789 mRNA_6421 0.54 0.8
765,722 + 14789 mRNA_6421 0.59 0.2
766,229 - 14790 mRNA_6422 0.10 1.3
766,555 - 14790 mRNA_6422 0.27 -0.3
766,659 + 14790 mRNA_6422 0.32 -0.4
766,878 + 14790 mRNA_6422 0.44 -0.1
767,143 + 14790 mRNA_6422 0.57 -0.5
767,163 + 14790 mRNA_6422 0.58 -0.5
767,234 - 14790 mRNA_6422 0.62 0.5
767,323 + 14790 mRNA_6422 0.66 -1.0
767,352 + 14790 mRNA_6422 0.68 2.2
767,355 - 14790 mRNA_6422 0.68 0.9
767,469 + 14790 mRNA_6422 0.74 -0.0
767,555 - 14790 mRNA_6422 0.78 2.5
767,708 - 14790 mRNA_6422 0.86 0.7
767,862 + 0.4
767,863 + 0.5
767,872 + 0.1
768,001 + -0.6
768,116 + 0.1
768,297 + 0.6
768,306 - 0.5
768,312 + -0.0
768,366 + 1.8
768,595 + 14791 mRNA_6423 0.32 0.3