Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6411

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6411: 14779 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 746136 to 749829 14779 mRNA_6412: 14780 - HMMPfam-F-box-like-PF12937, at 750026 to 751228 14780

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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745,168 + 1.6
745,204 + 1.0
745,450 - 0.4
745,617 - 2.0
745,888 - -0.1
745,893 - 0.4
745,907 - 1.0
745,908 - 0.1
745,909 + -0.2
745,922 - 0.2
745,922 - 0.4
746,040 + 0.5
746,043 - -0.4
746,051 - 0.2
746,053 + 0.3
746,062 - 1.0
746,085 + -0.1
746,215 - 2.1
746,501 + -0.6
746,510 + 14779 mRNA_6411 0.10 -0.4
746,969 + 14779 mRNA_6411 0.23 -0.2
749,780 + -0.2
750,052 + 2.5
750,088 + 3.0
750,471 - 14780 mRNA_6412 0.37 -0.4
750,660 + 14780 mRNA_6412 0.53 -0.0