Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6395

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6394: 14762 - HMMPfam-Asparagine synthase-PF00733,SUPERFAMILY--SSF52402,SUPERFAMILY--SSF56235, at 710467 to 712891 14762 mRNA_6395: 14763 - K19403 MCPH1 microcephalin, at 713200 to 716170 14763 mRNA_6396: 14764 - Hypothetical Protein, at 716861 to 718717 14764

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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712,256 + 14762 mRNA_6394 0.74 3.3
712,460 - 14762 mRNA_6394 0.82 -1.0
712,541 - 14762 mRNA_6394 0.86 0.8
712,636 - 14762 mRNA_6394 0.89 -0.6
712,637 + 14762 mRNA_6394 0.89 0.0
713,267 + 0.4
713,285 - 0.6
713,286 + 0.4
713,428 - 1.4
713,502 + 14763 mRNA_6395 0.10 -0.7
713,704 - 14763 mRNA_6395 0.17 1.6
713,704 - 14763 mRNA_6395 0.17 -0.3
713,710 + 14763 mRNA_6395 0.17 0.7
713,800 - 14763 mRNA_6395 0.20 -0.8
714,278 - 14763 mRNA_6395 0.36 0.1
714,444 + 14763 mRNA_6395 0.42 -0.3
714,522 - 14763 mRNA_6395 0.44 -0.8
714,579 + 14763 mRNA_6395 0.46 0.3
714,737 + 14763 mRNA_6395 0.52 -0.8
715,443 + 14763 mRNA_6395 0.75 1.5
715,566 - 14763 mRNA_6395 0.80 0.1
715,834 - 14763 mRNA_6395 0.89 -0.6
715,875 + 1.4
715,882 - 0.7
716,019 + 1.0
716,020 - 1.0
716,308 - 2.0
716,328 - 0.1
716,347 - 0.8
716,356 - 1.1
716,396 - 0.5
716,456 + -0.3
716,479 + 0.1
716,517 + 1.2
717,077 + 14764 mRNA_6396 0.12 0.7