Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6392

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6391: 14759 - K11558 SPC25 kinetochore protein Spc25, fungi type, at 703193 to 704324 14759 mRNA_6392: 14760 - KOG4533 Uncharacterized conserved protein, at 704609 to 706220 14760 mRNA_6393: 14761 - KOG3823 Uncharacterized conserved protein, at 706440 to 709966 14761

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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704,325 - 0.3
704,465 - 0.5
704,726 - -1.0
704,918 + 14760 mRNA_6392 0.19 -0.7
705,728 + 14760 mRNA_6392 0.69 1.6
705,887 + 14760 mRNA_6392 0.79 -0.6
705,901 - 14760 mRNA_6392 0.80 -0.8
705,904 + 14760 mRNA_6392 0.80 -1.0
705,908 - 14760 mRNA_6392 0.81 0.8
705,950 + 14760 mRNA_6392 0.83 1.0
706,022 + 14760 mRNA_6392 0.88 0.4
706,073 - -1.2
706,116 + 3.4
706,224 + 1.2
706,348 - -1.2
706,349 - 0.9
706,354 - -0.2
706,366 + 1.3
706,375 - 1.4
706,380 - -2.2
706,381 + 0.1
706,381 + -1.3
706,383 + 0.3
706,392 + -1.2
706,417 - -0.1
706,434 + -0.5
706,676 + 0.2
706,683 + -0.3
706,961 + 14761 mRNA_6393 0.15 -1.2
706,963 - 14761 mRNA_6393 0.15 -2.6
706,965 + 14761 mRNA_6393 0.15 2.3
707,098 + 14761 mRNA_6393 0.19 0.2