Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6385

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6384: 14752 - K13201 TIA1, TIAL1 nucleolysin TIA-1/TIAR, at 685747 to 687315 14752 mRNA_6385: 14753 - K03107 SRP68 signal recognition particle subunit SRP68, at 687746 to 690070 14753 mRNA_6386: 14754 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 690611 to 691768 14754

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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687,312 + -1.6
687,315 - 1.6
687,632 - -1.4
687,667 - 1.3
687,747 - -1.2
687,774 - -1.0
688,075 + 14753 mRNA_6385 0.14 -0.3
689,813 - 14753 mRNA_6385 0.89 -1.3
690,117 - 1.7
690,117 - 0.3
690,117 - 0.3
690,117 - -0.6
690,125 + -1.1
690,128 - -1.9
690,130 - -0.8
690,161 + -0.1
690,418 - -0.1
690,419 - 1.5
690,439 + 0.6
690,493 + 0.0
690,853 + 14754 mRNA_6386 0.21 -1.4
690,861 + 14754 mRNA_6386 0.22 0.7