Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6376

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6375: 14743 - K01178 E3.2.1.3 glucoamylase, at 666615 to 668807 14743 mRNA_6376: 14744 - K14811 DBP3 ATP-dependent RNA helicase DBP3, at 669168 to 671272 14744

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
668,192 + 14743 mRNA_6375 0.72 3.8
668,198 - 14743 mRNA_6375 0.72 3.9
668,634 - -0.2
668,752 + 1.3
668,789 - -0.1
668,869 - -1.6
668,918 + 1.6
668,922 - 2.0
668,930 + 0.9
668,936 - -0.0
668,965 + 1.3
668,967 + -1.2
668,998 - 1.9
669,108 + -1.8
669,110 - 0.7
669,111 - 0.7
669,111 - 0.5
669,116 + -1.9
669,119 - -1.1
669,120 + 0.4
669,124 - -0.3
669,125 - -0.4
669,126 - 1.3
669,133 - -1.1
669,134 + -0.5
669,137 + -0.1
669,146 - -0.1
669,274 + -0.9
669,287 + 0.2
669,295 - -1.1
669,302 - -1.4
669,391 + 14744 mRNA_6376 0.11 -0.1
669,564 - 14744 mRNA_6376 0.19 0.5
669,710 - 14744 mRNA_6376 0.26 1.2
669,899 - 14744 mRNA_6376 0.35 -1.0
670,036 - 14744 mRNA_6376 0.41 1.5
670,166 - 14744 mRNA_6376 0.47 1.1
670,188 + 14744 mRNA_6376 0.48 0.2
670,199 + 14744 mRNA_6376 0.49 0.7
670,608 + 14744 mRNA_6376 0.68 0.5
670,750 + 14744 mRNA_6376 0.75 0.3
670,750 - 14744 mRNA_6376 0.75 0.4
670,906 - 14744 mRNA_6376 0.83 1.1
671,302 - 0.2
671,378 + 0.3
671,428 - -0.5
671,517 - 0.1
671,526 - 0.8
671,762 - -0.5
671,857 - 0.4
672,064 + 2.1
672,092 - 0.1
672,130 + -0.5