Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6325

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6324: 14692 - Hypothetical Protein, at 549404 to 551693 14692 mRNA_6325: 14693 - Hypothetical Protein, at 552273 to 554258 14693 mRNA_6326: 14694 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 554507 to 555774 14694

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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551,505 - 0.1
551,681 - 1.9
551,780 - -0.2
551,787 - -2.1
551,787 - -0.8
551,792 + 0.0
551,808 - 0.4
551,823 - -1.4
551,827 - 0.2
551,832 - -0.3
551,837 + 2.7
551,838 - -1.6
551,841 - -0.8
551,842 + -1.0
551,846 + 0.3
551,997 + 2.5
552,126 + -0.7
552,132 + 0.9
552,438 - 0.3
552,875 - 14693 mRNA_6325 0.30 -0.1
553,039 + 14693 mRNA_6325 0.39 -1.2
553,163 - 14693 mRNA_6325 0.45 -1.3
553,166 + 14693 mRNA_6325 0.45 0.5
553,305 + 14693 mRNA_6325 0.52 0.7
553,325 - 14693 mRNA_6325 0.53 -0.2
553,351 + 14693 mRNA_6325 0.54 0.9
553,438 - 14693 mRNA_6325 0.59 1.0
553,456 - 14693 mRNA_6325 0.60 1.6
553,457 - 14693 mRNA_6325 0.60 -1.5
553,460 + 14693 mRNA_6325 0.60 -1.0
553,464 + 14693 mRNA_6325 0.60 -0.4
553,477 - 14693 mRNA_6325 0.61 -0.1
553,479 - 14693 mRNA_6325 0.61 2.4
553,480 + 14693 mRNA_6325 0.61 0.3
553,522 - 14693 mRNA_6325 0.63 0.7
553,545 - 14693 mRNA_6325 0.64 0.5
553,546 + 14693 mRNA_6325 0.64 -1.3
553,546 + 14693 mRNA_6325 0.64 0.3
553,546 - 14693 mRNA_6325 0.64 0.5
553,548 - 14693 mRNA_6325 0.64 2.0
553,560 + 14693 mRNA_6325 0.65 0.7
553,582 + 14693 mRNA_6325 0.66 0.5
553,587 - 14693 mRNA_6325 0.66 1.6
553,592 - 14693 mRNA_6325 0.66 -0.4
553,595 - 14693 mRNA_6325 0.67 4.2
553,614 - 14693 mRNA_6325 0.68 -0.4
553,623 + 14693 mRNA_6325 0.68 0.6
553,623 + 14693 mRNA_6325 0.68 0.2
553,629 - 14693 mRNA_6325 0.68 0.7
553,632 + 14693 mRNA_6325 0.68 1.9
553,634 - 14693 mRNA_6325 0.69 -0.5
553,647 - 14693 mRNA_6325 0.69 0.2
553,652 + 14693 mRNA_6325 0.69 0.0
553,653 + 14693 mRNA_6325 0.69 1.1
553,657 + 14693 mRNA_6325 0.70 0.1
553,661 + 14693 mRNA_6325 0.70 0.3
553,670 + 14693 mRNA_6325 0.70 0.4
553,673 - 14693 mRNA_6325 0.70 -0.2
553,673 + 14693 mRNA_6325 0.70 0.2
553,687 + 14693 mRNA_6325 0.71 2.4
553,711 + 14693 mRNA_6325 0.72 -0.9
553,728 + 14693 mRNA_6325 0.73 -1.8
553,730 + 14693 mRNA_6325 0.73 1.2
553,740 + 14693 mRNA_6325 0.74 -0.0
553,762 + 14693 mRNA_6325 0.75 0.7
553,768 - 14693 mRNA_6325 0.75 -2.4
553,774 - 14693 mRNA_6325 0.76 -0.4
553,778 + 14693 mRNA_6325 0.76 1.0
553,779 - 14693 mRNA_6325 0.76 1.0
553,785 - 14693 mRNA_6325 0.76 -0.2
553,786 + 14693 mRNA_6325 0.76 0.3
553,786 + 14693 mRNA_6325 0.76 1.3
553,791 + 14693 mRNA_6325 0.76 -0.3
553,851 - 14693 mRNA_6325 0.79 1.1
553,866 - 14693 mRNA_6325 0.80 2.5
553,878 - 14693 mRNA_6325 0.81 -0.1
553,895 - 14693 mRNA_6325 0.82 0.1
553,923 + 14693 mRNA_6325 0.83 0.1
553,934 - 14693 mRNA_6325 0.84 -0.1
553,945 - 14693 mRNA_6325 0.84 0.0
553,963 - 14693 mRNA_6325 0.85 -0.6
553,978 + 14693 mRNA_6325 0.86 -0.2
554,030 + 14693 mRNA_6325 0.88 0.0
554,050 + 14693 mRNA_6325 0.89 -0.1
554,055 - 14693 mRNA_6325 0.90 -0.8
554,061 + 0.3
554,072 + -2.2
554,080 + 1.2
554,087 - -0.8
554,105 + 1.4
554,211 + 1.6
554,306 + -0.1
554,331 + 0.3
554,350 - 1.7
554,368 - -2.4
554,369 + 1.0
554,378 + -1.0
554,494 - 0.7
554,502 - -1.2
554,511 + -1.2
554,517 - 1.1