Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6324

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6323: 14691 - Hypothetical Protein, at 545405 to 548741 14691 mRNA_6324: 14692 - Hypothetical Protein, at 549404 to 551693 14692 mRNA_6325: 14693 - Hypothetical Protein, at 552273 to 554258 14693

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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548,537 - 0.2
548,699 + -0.4
548,856 + -1.0
548,988 + -0.5
548,998 - 0.3
549,140 - -0.4
549,147 - 1.2
549,149 - 0.5
549,149 - 1.1
549,235 + -1.5
549,271 + 0.9
549,280 + 1.6
549,288 + 0.1
549,292 + -1.2
549,296 - 1.1
549,300 + 0.5
549,310 - 0.5
549,312 - 1.9
549,314 + 0.9
549,318 - 0.2
549,318 + 1.2
549,319 - 1.0
549,320 + 2.5
549,324 - 0.6
549,402 - 0.0
549,443 - -1.1
549,451 + 0.8
549,455 + 2.8
549,479 - 1.6
549,533 - 0.9
549,555 - 0.5
549,581 + -0.5
549,647 + 14692 mRNA_6324 0.11 -0.9
549,708 - 14692 mRNA_6324 0.13 0.9
549,742 - 14692 mRNA_6324 0.15 1.7
549,746 + 14692 mRNA_6324 0.15 0.3
549,754 - 14692 mRNA_6324 0.15 -0.2
549,755 + 14692 mRNA_6324 0.15 0.9
549,764 - 14692 mRNA_6324 0.16 -0.6
549,769 + 14692 mRNA_6324 0.16 -0.1
549,774 + 14692 mRNA_6324 0.16 -2.2
549,914 + 14692 mRNA_6324 0.22 -0.5
550,490 - 14692 mRNA_6324 0.47 -1.2
550,514 - 14692 mRNA_6324 0.48 -0.5
550,795 - 14692 mRNA_6324 0.61 0.0
550,929 - 14692 mRNA_6324 0.67 1.3
551,084 + 14692 mRNA_6324 0.73 -1.2
551,086 + 14692 mRNA_6324 0.73 2.0
551,228 - 14692 mRNA_6324 0.80 0.6
551,505 - 0.1
551,681 - 1.9
551,780 - -0.2
551,787 - -2.1
551,787 - -0.8
551,792 + 0.0
551,808 - 0.4
551,823 - -1.4
551,827 - 0.2
551,832 - -0.3
551,837 + 2.7
551,838 - -1.6
551,841 - -0.8
551,842 + -1.0
551,846 + 0.3
551,997 + 2.5
552,126 + -0.7
552,132 + 0.9
552,438 - 0.3