Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6322

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6321: 14689 - Hypothetical Protein, at 542148 to 544178 14689 mRNA_6322: 14690 - K09420 MYB myb proto-oncogene protein, at 544392 to 544811 14690 mRNA_6323: 14691 - Hypothetical Protein, at 545405 to 548741 14691

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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543,577 + 14689 mRNA_6321 0.70 1.5
543,670 + 14689 mRNA_6321 0.75 0.0
544,019 - 0.5
544,021 - 1.7
544,171 - 2.1
544,300 - -0.9
544,595 + 14690 mRNA_6322 0.48 0.2
544,599 + 14690 mRNA_6322 0.49 0.7
544,605 + 14690 mRNA_6322 0.51 -0.2
544,611 - 14690 mRNA_6322 0.52 0.0
544,619 + 14690 mRNA_6322 0.54 0.4
544,751 + 14690 mRNA_6322 0.85 0.4
544,760 - 14690 mRNA_6322 0.88 -0.1
544,814 - -0.5
544,877 - 0.5
544,890 - 0.3
545,170 - 1.7
545,291 + -0.7
545,306 + 0.5
545,316 - 0.5
545,316 + 1.8
545,316 - 0.8
545,328 + 0.0
545,378 - 0.7
545,465 - 1.3
545,466 - 2.2
545,466 - 1.3
545,608 - -1.3