Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6321

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6320: 14688 - Hypothetical Protein, at 540621 to 541463 14688 mRNA_6321: 14689 - Hypothetical Protein, at 542148 to 544178 14689 mRNA_6322: 14690 - K09420 MYB myb proto-oncogene protein, at 544392 to 544811 14690

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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541,149 + 14688 mRNA_6320 0.63 1.8
541,149 - 14688 mRNA_6320 0.63 1.2
541,155 + 14688 mRNA_6320 0.63 0.2
541,159 + 14688 mRNA_6320 0.64 0.8
541,165 - 14688 mRNA_6320 0.65 -1.6
541,171 - 14688 mRNA_6320 0.65 -1.7
541,182 + 14688 mRNA_6320 0.67 -0.4
541,182 - 14688 mRNA_6320 0.67 -0.6
541,184 + 14688 mRNA_6320 0.67 3.1
541,226 + 14688 mRNA_6320 0.72 -0.1
541,234 - 14688 mRNA_6320 0.73 2.3
541,235 - 14688 mRNA_6320 0.73 0.3
541,237 + 14688 mRNA_6320 0.73 1.7
541,248 + 14688 mRNA_6320 0.74 1.4
541,250 + 14688 mRNA_6320 0.75 0.2
541,252 - 14688 mRNA_6320 0.75 0.9
541,253 + 14688 mRNA_6320 0.75 0.6
541,264 - 14688 mRNA_6320 0.76 -0.8
541,293 - 14688 mRNA_6320 0.80 -0.3
541,295 - 14688 mRNA_6320 0.80 0.9
541,330 + 14688 mRNA_6320 0.84 3.4
541,332 - 14688 mRNA_6320 0.84 0.8
541,334 - 14688 mRNA_6320 0.85 0.1
541,343 - 14688 mRNA_6320 0.86 1.6
541,348 - 14688 mRNA_6320 0.86 -0.1
541,360 - 14688 mRNA_6320 0.88 -0.6
541,371 - 14688 mRNA_6320 0.89 0.7
541,373 + 14688 mRNA_6320 0.89 1.7
541,380 + 1.2
541,380 + 0.5
541,397 - 0.0
541,405 + -0.5
541,411 - 1.0
541,464 + 0.0
541,476 - 0.9
541,483 + -0.9
541,501 + 1.3
541,510 + 0.2
541,517 - 0.1
541,520 + -0.6
541,525 + -0.0
541,529 - -2.2
541,668 + 0.0
541,670 - -2.6
541,679 + 0.6
541,696 + 1.9
541,713 + -1.4
541,754 - -0.1
541,829 - -0.1
541,833 + 0.1
542,265 - 0.1
542,388 + 14689 mRNA_6321 0.12 0.0
542,552 + 14689 mRNA_6321 0.20 0.4
542,554 - 14689 mRNA_6321 0.20 -0.5
542,559 - 14689 mRNA_6321 0.20 1.0
542,714 + 14689 mRNA_6321 0.28 1.0
542,859 + 14689 mRNA_6321 0.35 -0.0
543,010 + 14689 mRNA_6321 0.42 0.2
543,577 + 14689 mRNA_6321 0.70 1.5
543,670 + 14689 mRNA_6321 0.75 0.0
544,019 - 0.5
544,021 - 1.7
544,171 - 2.1
544,300 - -0.9
544,595 + 14690 mRNA_6322 0.48 0.2
544,599 + 14690 mRNA_6322 0.49 0.7
544,605 + 14690 mRNA_6322 0.51 -0.2
544,611 - 14690 mRNA_6322 0.52 0.0
544,619 + 14690 mRNA_6322 0.54 0.4
544,751 + 14690 mRNA_6322 0.85 0.4
544,760 - 14690 mRNA_6322 0.88 -0.1
544,814 - -0.5
544,877 - 0.5
544,890 - 0.3
545,170 - 1.7