Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6304

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6303: 14671 - HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338, at 480428 to 482328 14671 mRNA_6304: 14672 - Hypothetical Protein, at 482643 to 484084 14672

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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481,855 - 14671 mRNA_6303 0.75 -0.4
482,110 - 14671 mRNA_6303 0.88 0.5
482,253 - 0.5
482,386 - -1.1
482,428 - -0.5
482,431 + 1.1
482,431 + 1.1
482,451 - 0.1
482,732 + -0.3
482,753 + 0.0
483,027 + 14672 mRNA_6304 0.27 -1.8
483,211 - 14672 mRNA_6304 0.39 1.9
483,288 - 14672 mRNA_6304 0.45 1.0
483,309 + 14672 mRNA_6304 0.46 0.7
483,642 + 14672 mRNA_6304 0.69 0.5
483,738 - 14672 mRNA_6304 0.76 -0.5
483,881 + 14672 mRNA_6304 0.86 1.9
484,023 - -2.8
484,049 + -0.1
484,323 - 0.1
484,323 - 1.4
484,326 + 2.2
484,328 - 0.9
484,329 - 1.0
484,335 + 2.1
484,340 - 0.2
484,344 + 1.9
484,345 + 0.1
484,354 + 0.1
484,355 - 1.6
484,356 + 0.2
484,357 - 0.2
484,358 - 0.3
484,363 + 0.5
484,365 - 0.1
484,366 - -0.2
484,367 + 0.2
484,367 + 0.9
484,372 + 2.1
484,373 + -1.1
484,430 + -0.4
484,457 + -0.1
484,489 - -0.5
484,504 - -0.9
484,505 + -0.1
484,520 + 1.8
484,523 + 0.1
484,629 - 1.7
484,650 - -0.4
484,660 + 1.8
484,660 - 1.1
484,666 - 1.6
484,673 - -0.0
484,711 + -0.0
484,724 + -0.1
484,756 + -1.8
484,758 + 0.4
484,758 + 0.3
484,773 - 0.8
484,773 - 2.3
484,774 + 2.0
484,781 + 0.0
484,792 - -0.3
484,793 - 0.2
484,868 + -0.0
484,882 + -0.3