Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6290

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6289: 14657 - Hypothetical Protein, at 449519 to 450929 14657 mRNA_6290: 14658 - KOG0394 Ras-related GTPase, at 451269 to 452760 14658 mRNA_6291: 14659 - K12182 HGS, HRS, VPS27 hepatocyte growth factor-regulated tyrosine kinase substrate, at 453109 to 455308 14659

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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450,349 + 14657 mRNA_6289 0.59 -0.1
450,876 + 0.4
450,915 - 0.8
450,943 + 0.6
451,096 - -0.5
451,237 - 2.3
451,373 + -0.7
451,383 - 0.5
451,807 + 14658 mRNA_6290 0.36 0.4
452,084 + 14658 mRNA_6290 0.55 1.4
452,250 - 14658 mRNA_6290 0.66 0.4
452,523 + 14658 mRNA_6290 0.84 -0.2
452,578 - 14658 mRNA_6290 0.88 0.2
452,690 - 0.6
452,716 + 0.8
452,841 - -0.7
452,842 - -0.2
452,861 + 1.2
453,036 + -1.2
453,178 - 0.9
453,191 - -0.5
453,217 + -0.5
453,466 + 14659 mRNA_6291 0.16 -0.1
453,608 + 14659 mRNA_6291 0.23 -0.8