Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6278

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6277: 14645 - KOG2812 Uncharacterized conserved protein, at 425050 to 426717 14645 mRNA_6278: 14646 - K17080 PHB1 prohibitin 1, at 426858 to 428286 14646 mRNA_6279: 14647 - K13110 MFAP1 microfibrillar-associated protein 1, at 428487 to 430631 14647

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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426,796 + -1.4
426,924 - 0.7
426,937 - 0.4
426,941 + -0.6
427,356 + 14646 mRNA_6278 0.35 1.1
427,802 - 14646 mRNA_6278 0.66 0.3
427,802 + 14646 mRNA_6278 0.66 0.8
429,267 - 14647 mRNA_6279 0.36 0.8