Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6271

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6270: 14638 - KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase, at 407745 to 410533 14638 mRNA_6271: 14639 - Hypothetical Protein, at 410534 to 411923 14639

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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409,955 - 14638 mRNA_6270 0.79 1.7
410,165 - 14638 mRNA_6270 0.87 0.6
410,174 + 14638 mRNA_6270 0.87 1.3
410,301 - 1.2
410,447 - 1.5
410,471 + -0.2
410,476 - 1.2
410,572 + 1.5
410,592 - -2.5
410,599 + 0.0
410,601 + 0.4
410,606 + 0.2
410,607 + -0.1
410,617 - 1.0
410,765 - 14639 mRNA_6271 0.17 0.5
410,770 - 14639 mRNA_6271 0.17 -1.0
410,781 + 14639 mRNA_6271 0.18 -1.7
410,781 - 14639 mRNA_6271 0.18 -0.6
410,789 + 14639 mRNA_6271 0.18 0.1
410,792 + 14639 mRNA_6271 0.19 1.0
410,792 - 14639 mRNA_6271 0.19 0.6
410,797 - 14639 mRNA_6271 0.19 1.0
410,816 + 14639 mRNA_6271 0.20 1.2
410,925 - 14639 mRNA_6271 0.28 0.4
410,928 + 14639 mRNA_6271 0.28 -0.6
411,080 + 14639 mRNA_6271 0.39 1.8
411,095 - 14639 mRNA_6271 0.40 1.8
411,106 + 14639 mRNA_6271 0.41 -0.3
411,190 + 14639 mRNA_6271 0.47 -0.3
411,233 - 14639 mRNA_6271 0.50 0.1
411,253 - 14639 mRNA_6271 0.52 1.6
411,254 + 14639 mRNA_6271 0.52 0.9
411,398 - 14639 mRNA_6271 0.62 -1.2
411,522 - 14639 mRNA_6271 0.71 -0.5
411,527 - 14639 mRNA_6271 0.71 2.8
412,013 - -0.2
412,013 + 3.7