Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6268

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6267: 14635 - KOG1721 FOG Zn-finger, at 399476 to 403885 14635 mRNA_6268: 14636 - HMMPfam-Survival motor neuron protein (SMN)-PF06003, at 404053 to 405342 14636 mRNA_6269: 14637 - KOG1336 Monodehydroascorbate/ferredoxin reductase, at 405556 to 407019 14637

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
403,180 - 14635 mRNA_6267 0.84 1.6
403,184 + 14635 mRNA_6267 0.84 0.3
403,341 + 14635 mRNA_6267 0.88 -1.7
403,477 + 0.8
403,491 + -0.1
403,496 - -0.8
403,517 - -2.1
403,521 - 0.6
403,641 - -2.5
403,663 + 1.7
403,667 - 0.3
403,667 - 1.6
403,673 + -0.8
403,683 + 0.3
403,684 + -2.0
403,699 + -0.2
403,945 - 0.1
403,952 - 0.5
403,967 + -1.3
403,973 + 2.6
403,973 + 0.6
403,982 - -0.0
403,985 - 0.2
403,986 + -1.0
403,986 + 2.1
403,989 + 0.4
403,994 - 2.5
403,995 + -0.5
403,998 + 1.4
403,999 - 0.5
404,000 + -0.2
404,005 + 1.3
404,007 + -0.4
404,013 + -1.2
404,021 + 0.8
404,126 - -0.4
404,133 - 0.1
404,139 - 0.3
404,143 + -0.4
404,159 + -0.8
404,164 - 0.9
404,164 - -0.6
404,288 - 14636 mRNA_6268 0.18 0.0
404,299 - 14636 mRNA_6268 0.19 2.5
405,337 + 0.9
405,603 + 0.4
405,631 - 0.8
405,763 - 14637 mRNA_6269 0.14 0.8
405,950 - 14637 mRNA_6269 0.27 -0.0
406,061 - 14637 mRNA_6269 0.34 0.6
406,229 - 14637 mRNA_6269 0.46 1.6