Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6261

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385089 to 388417 14630

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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382,089 + -0.3
382,089 + -0.9
382,104 + -0.9
382,110 - 1.1
382,132 + 0.1
382,143 - 0.6
382,189 - 0.8
382,195 - -0.4
382,212 + -0.1
382,220 + 1.0
382,238 - 0.6
382,240 - -0.4
382,249 + -0.2
382,254 - 1.1
382,264 - 1.4
382,289 - 1.4
382,293 - 1.4
382,307 + 0.1
382,324 + 0.9
382,332 + 0.8
382,340 + -1.3
382,345 + -0.0
382,349 - -0.6
382,360 + 1.8
382,363 + 0.0
382,365 + -1.0
382,369 + -1.1
382,370 - 0.7
382,370 - 1.0
382,375 + 0.1
382,381 + 1.1
382,418 - -0.3
382,423 + -0.4
382,433 + 0.1
382,434 - 1.0
382,436 + 0.5
382,436 - -1.3
382,436 - 0.7
382,437 - 0.2
382,448 - 4.2
382,449 + -0.5
382,451 + 0.6
382,471 - -0.5
382,503 + 0.7
382,516 + -1.2
382,529 - 0.1
382,531 + 0.6
382,531 + 1.4
382,535 + 0.1
382,542 + 0.4
382,543 - -0.7
382,546 - 0.2
382,549 - 0.5
382,550 - 2.2
382,556 + 0.4
382,566 - 2.3
382,570 - 0.8
382,571 - 0.5
382,573 - -0.2
382,575 - -0.4
382,583 - 1.6
382,583 - 2.0
382,586 + -0.0
382,586 + 1.0
382,587 + 0.8
382,588 - 2.7
382,588 - -0.1
382,590 - -0.3
382,592 - 0.2
382,594 + 0.8
382,603 + 3.4
382,652 - -1.1
382,663 - 0.5
382,691 - -0.0
382,695 + 1.0
382,700 + 2.0
382,707 - 0.5
382,713 - 0.5
382,724 + 1.1
382,726 + 0.3
382,732 + 1.8
382,866 - 0.7
382,884 + 0.9
383,004 - 0.8
383,005 + 0.2
383,014 - -0.9
383,016 + 0.8
383,158 - 0.4
383,166 + -1.2
383,738 - 14629 mRNA_6261 0.45 -0.5
383,822 + 14629 mRNA_6261 0.50 -0.2
383,893 - 14629 mRNA_6261 0.55 -0.1
383,903 + 14629 mRNA_6261 0.55 1.2
384,042 - 14629 mRNA_6261 0.64 3.1
384,044 + 14629 mRNA_6261 0.64 -0.9
384,045 - 14629 mRNA_6261 0.64 2.1
384,188 + 14629 mRNA_6261 0.73 -0.4
384,494 - 1.2
384,502 - 0.6
384,654 - 1.2
384,686 - 0.6
384,779 - -1.9
384,801 - 1.3
384,803 - 0.9
384,812 + 1.8
384,823 - 1.8
384,848 - 0.1
384,850 - 1.7
384,867 + -0.9
384,877 - 1.0
384,883 - 0.1
384,893 - 3.3
384,894 - 0.7
384,897 + 1.4
384,897 + -1.5
384,899 + 0.1
384,900 + 0.8
384,905 - 0.1
384,933 + -0.2
384,934 - 0.4
384,934 - 0.2
384,939 + 0.2
384,940 - 0.1
384,940 - 0.3
384,946 + -1.2
384,955 + -0.1
384,964 - -0.8
384,976 + -0.4
384,983 - 0.6
384,993 - 1.5
385,074 - -0.2
385,079 - -0.5
385,080 + -1.2
385,087 - -1.6
385,091 + 0.2
385,092 - -0.1
385,186 + 1.1
385,217 + -1.4
385,257 - 1.3
385,276 + -0.5
385,297 - -0.0
385,329 - 0.1
385,332 + 0.2
385,363 - 0.4
385,389 - 1.9
385,394 - 1.8
385,401 - -0.2
385,558 + 14630 mRNA_6262 0.14 -0.3