Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6249

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6248: 14616 - Interpro GET complex subunit GET2 0, at 350255 to 351472 14616 mRNA_6249: 14617 - K01052 LIPA lysosomal acid lipase/cholesteryl ester hydrolase, at 351854 to 354817 14617 mRNA_6250: 14618 - Hypothetical Protein, at 355476 to 357206 14618

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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351,491 - 2.0
351,651 + 2.7
351,659 - -1.2
351,661 - 1.1
351,666 - 0.6
351,677 + 0.2
351,722 + -1.0
351,741 - 1.0
351,771 - -0.3
351,771 - 0.1
351,772 - 0.1
351,772 + -0.0
351,780 - -0.4
351,780 + -0.1
351,792 - 0.7
351,797 - 0.4
351,798 + 0.9
351,801 - -0.5
351,801 - 1.3
351,803 + 0.7
351,955 - -0.8
351,968 - 2.5
351,977 - 0.9
351,979 - 0.5
351,986 - 1.1
351,996 + 2.9
352,122 - 0.9
352,124 + -2.1
352,311 + 14617 mRNA_6249 0.15 0.9
352,395 + 14617 mRNA_6249 0.18 -0.1
352,552 - 14617 mRNA_6249 0.24 0.5
352,675 - 14617 mRNA_6249 0.28 0.1
352,701 + 14617 mRNA_6249 0.29 0.4
353,080 - 14617 mRNA_6249 0.41 0.4
353,088 - 14617 mRNA_6249 0.42 -0.5
353,094 + 14617 mRNA_6249 0.42 0.5
354,122 - 14617 mRNA_6249 0.77 -0.2
354,241 - 14617 mRNA_6249 0.81 -0.6
354,241 - 14617 mRNA_6249 0.81 -2.1
355,104 + 0.5
355,138 - 0.8
355,138 + 0.1
355,261 - 1.3
355,267 - 0.1
355,275 + -0.4
355,279 + 0.5
355,290 - 1.4
355,291 - -0.1
355,291 - -0.2
355,412 + 0.7
355,414 - 1.5
355,567 + 0.5