Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6245

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6245: 14613 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 343220 to 344409 14613

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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342,264 + 0.0
342,309 - -0.2
342,428 + 1.1
342,453 + 1.8
342,463 + 0.8
342,469 + 2.4
342,470 - -2.3
342,607 - 0.7
342,609 - 1.6
342,621 + -0.4
342,659 - 1.0
342,760 - -0.1
342,778 + -0.7
342,797 + 0.1
342,828 - -0.3
342,886 + 0.3
342,922 + 0.6
342,941 + 0.8
342,963 - -1.3
342,971 + 0.4
342,988 - 0.2
343,679 + 14613 mRNA_6245 0.39 0.1
343,982 + 14613 mRNA_6245 0.64 0.4
344,406 + 0.6
344,865 + 0.3
345,166 - -1.2
345,186 + 0.0
345,190 + 0.7
345,341 + -1.4
345,360 - -1.2
345,374 - 1.8
345,384 - -1.5
345,392 + -1.7
345,395 - 0.0
345,407 - -0.2